Proteomic and functional annotation analysis of injured peripheral nerves reveals ApoE as a protein upregulated by injury that is modulated by metformin treatment

Persistent Link:
http://hdl.handle.net/10150/610218
Title:
Proteomic and functional annotation analysis of injured peripheral nerves reveals ApoE as a protein upregulated by injury that is modulated by metformin treatment
Author:
Melemedjian, Ohannes; Yassine, Hussein; Shy, Adia; Price, Theodore
Affiliation:
Department of Pharmacology, The University of Arizona School of Medicine, 1501 N Campbell Ave, Tucson, AZ, 85724, USA; Department of Medicine, The University of Arizona School of Medicine, Tucson, AZ, USA; Bio5 Institute, The University of Arizona, Tucson, AZ, USA; Graduate Interdisciplinary Program in Neuroscience, The University of Arizona, Tucson, AZ, USA; Department of Medicine, The University of Southern California, Los Angeles, CA, USA
Issue Date:
2013
Publisher:
BioMed Central
Citation:
Melemedjian et al. Molecular Pain 2013, 9:14 http://www.molecularpain.com/content/9/1/14
Journal:
Molecular Pain
Rights:
© 2013 Melemedjian et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0)
Collection Information:
This item is part of the UA Faculty Publications collection. For more information this item or other items in the UA Campus Repository, contact the University of Arizona Libraries at repository@u.library.arizona.edu.
Abstract:
BACKGROUND:Peripheral nerve injury (PNI) results in a fundamental reorganization of the translational machinery in the injured peripheral nerve such that protein synthesis is increased in a manner linked to enhanced mTOR and ERK activity. We have shown that metformin treatment, which activates adenosine monophosphate-activated protein kinase (AMPK), reverses tactile allodynia and enhanced translation following PNI. To gain a better understanding of how PNI changes the proteome of the sciatic nerve and ascertain how metformin treatment may cause further change, we conducted a range of unbiased proteomic studies followed by biochemical experiments to confirm key results.RESULTS:We used multidimensional protein identification technology (MUDPIT) on sciatic nerve samples taken from rats with sham surgery, spinal nerve ligation (SNL) surgery or SNL + 200mg/kg metformin treatment. MUDPIT analysis on these complex samples yielded a wide variety of proteins that were sorted according to their peptide counts in SNL and SNL + metformin compared to sham. These proteins were then submitted to functional annotation analysis to identify potential functional networks altered by SNL and SNL + metformin treatment. Additionally, we used click-chemistry-based labeling and purification of nascently synthesized proteins followed by MUDPIT to further identify peptides that were synthesized within the injured nerve. With these methods, we identified apolipoprotein E (ApoE) as a protein profoundly increased by PNI and further increased by PNI and metformin. This result was confirmed by Western Blot of samples from SNL rats and spared nerve injury (SNI) mice. Furthermore, we show that 7-day treatment with metformin in naive mice leads to an increase in ApoE expression in the sciatic nerve.CONCLUSIONS:These proteomic findings support the hypothesis that PNI leads to a fundamental reorganization of gene expression within the injured nerve. Our data identify a key association of ApoE with PNI that is regulated by metformin treatment. We conclude from the known functions of ApoE in the nervous system that ApoE may be an intrinsic factor linked to nerve regeneration after PNI, an effect that is further enhanced by metformin treatment.
EISSN:
1744-8069
DOI:
10.1186/1744-8069-9-14
Version:
Final published version
Additional Links:
http://mpx.sagepub.com/content/9/1744-8069-9-14.full

Full metadata record

DC FieldValue Language
dc.contributor.authorMelemedjian, Ohannesen
dc.contributor.authorYassine, Husseinen
dc.contributor.authorShy, Adiaen
dc.contributor.authorPrice, Theodoreen
dc.date.accessioned2016-05-20T09:01:23Z-
dc.date.available2016-05-20T09:01:23Z-
dc.date.issued2013en
dc.identifier.citationMelemedjian et al. Molecular Pain 2013, 9:14 http://www.molecularpain.com/content/9/1/14en
dc.identifier.doi10.1186/1744-8069-9-14en
dc.identifier.urihttp://hdl.handle.net/10150/610218-
dc.description.abstractBACKGROUND:Peripheral nerve injury (PNI) results in a fundamental reorganization of the translational machinery in the injured peripheral nerve such that protein synthesis is increased in a manner linked to enhanced mTOR and ERK activity. We have shown that metformin treatment, which activates adenosine monophosphate-activated protein kinase (AMPK), reverses tactile allodynia and enhanced translation following PNI. To gain a better understanding of how PNI changes the proteome of the sciatic nerve and ascertain how metformin treatment may cause further change, we conducted a range of unbiased proteomic studies followed by biochemical experiments to confirm key results.RESULTS:We used multidimensional protein identification technology (MUDPIT) on sciatic nerve samples taken from rats with sham surgery, spinal nerve ligation (SNL) surgery or SNL + 200mg/kg metformin treatment. MUDPIT analysis on these complex samples yielded a wide variety of proteins that were sorted according to their peptide counts in SNL and SNL + metformin compared to sham. These proteins were then submitted to functional annotation analysis to identify potential functional networks altered by SNL and SNL + metformin treatment. Additionally, we used click-chemistry-based labeling and purification of nascently synthesized proteins followed by MUDPIT to further identify peptides that were synthesized within the injured nerve. With these methods, we identified apolipoprotein E (ApoE) as a protein profoundly increased by PNI and further increased by PNI and metformin. This result was confirmed by Western Blot of samples from SNL rats and spared nerve injury (SNI) mice. Furthermore, we show that 7-day treatment with metformin in naive mice leads to an increase in ApoE expression in the sciatic nerve.CONCLUSIONS:These proteomic findings support the hypothesis that PNI leads to a fundamental reorganization of gene expression within the injured nerve. Our data identify a key association of ApoE with PNI that is regulated by metformin treatment. We conclude from the known functions of ApoE in the nervous system that ApoE may be an intrinsic factor linked to nerve regeneration after PNI, an effect that is further enhanced by metformin treatment.en
dc.language.isoenen
dc.publisherBioMed Centralen
dc.relation.urlhttp://mpx.sagepub.com/content/9/1744-8069-9-14.fullen
dc.rights© 2013 Melemedjian et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0)en
dc.titleProteomic and functional annotation analysis of injured peripheral nerves reveals ApoE as a protein upregulated by injury that is modulated by metformin treatmenten
dc.typeArticleen
dc.identifier.eissn1744-8069en
dc.contributor.departmentDepartment of Pharmacology, The University of Arizona School of Medicine, 1501 N Campbell Ave, Tucson, AZ, 85724, USAen
dc.contributor.departmentDepartment of Medicine, The University of Arizona School of Medicine, Tucson, AZ, USAen
dc.contributor.departmentBio5 Institute, The University of Arizona, Tucson, AZ, USAen
dc.contributor.departmentGraduate Interdisciplinary Program in Neuroscience, The University of Arizona, Tucson, AZ, USAen
dc.contributor.departmentDepartment of Medicine, The University of Southern California, Los Angeles, CA, USAen
dc.identifier.journalMolecular Painen
dc.description.collectioninformationThis item is part of the UA Faculty Publications collection. For more information this item or other items in the UA Campus Repository, contact the University of Arizona Libraries at repository@u.library.arizona.edu.en
dc.eprint.versionFinal published versionen
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